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lished another review. They highlight similar trends and add that 
AI supports crop breeding through data mining, multi-omics, 
environmental tracking, crop management practices, cross-
species inference, sustainability and economics. “Improvements 
in these areas could increase predictive accuracy for plant traits,” 
they explain, “thereby expediting breeding cycles and optimizing 
resource management.”
Earlier in 2025, a team in China reported that combining crop 
big data with AI allows researchers to model genomic, phe­
notypic and environmental data with greater precision. These 
models help breeders predict the genetic potential of future phe­
notypes and refine hybridization strategies. As a result, breeders 
can shorten breeding cycles and improve selection accuracy.
Another review, published in July 2025 in Nature by an inter­
national team spanning the U.S., U.K., Germany, Saudi Arabia, 
Australia and China, outlines how breeders can integrate elite 
alleles generated through these technologies into both existing 
and newly domesticated crops.
A team in China introduced the Breeding 5.0 framework. The 
framework positions AI as a tool that can “understand germ­
plasm,” by identifying markers and by interpreting structure, 
plasticity, regulatory logic and environmental interactions. This 
level of “germplasm intelligence” supports predictive trait mod­
eling, optimized parental design and more targeted selection. 
One of its key pillars is peopleless data capture. Automated 
phenotyping in trial plots, often referred to as high-throughput 
phenotyping platforms, speeds data collection, reduces labor 
and improves consistency.
Imaging Every Plot, Every Trait
To push phenotype selection further, AI systems rely on detailed 
image data from field plots. Breeders train these systems to 
detect specific traits and identify phenotypes of interest.
University of Guelph researcher Riley McConachie uses AI 
for wheat head detection and identifying fusarium head blight. 
He explains that traditional field scoring of traits such as disease 
levels, leaf angle and head size takes significant time and often 
introduces subjective error. In contrast, “AI analysis tools pro­
vide opportunities to significantly decrease the time required 
to evaluate these characteristics, either by solving the problem 
directly or by supporting the evaluation process.”
Drones, Robots and Field-Scale Data
Researchers at Iowa State University developed a thin “phe­
norobot” that moves between rows and autonomously captures 
images. It collects high-quality data while navigating around 
plants. Other teams use similar robotic systems, while drones 
and satellite imagery continue to expand coverage at scale.
In April 2025, a team at the University of Illinois Urbana-
Champaign published a study describing an AI vision system 
that identifies flowering traits using drone imagery. The system 
analyzed “heading” across thousands of plots containing geneti­
cally diverse populations of two miscanthus species. It identified 
heading nearly nine times faster than in-field human observation.
The team developed a custom learning approach called 
ESGAN. This method reduced the need for human-annotated 
training data by one to two orders of magnitude compared to 
traditional supervised learning. Researchers are now exploring 
whether ESGAN and similar tools can double breeding progress 
in perennial crops such as miscanthus by compressing pheno­
typing, selection and crossing into a single season.
“That would be a substantial gain,” University of Illinois 
Urbana-Champaign Center for Digital Agriculture’s Andrew 
Leakey says.
Leakey says the team has filed a patent and may commercial­
ize the technology with  the right opportunity. The group focuses 
on academic applications across multi-location crop trials and 
continues expanding AI-based computer vision tools for plant 
science. He says seed companies already use aerial remote sens­
ing widely, which could accelerate ESGAN’s adoption.
Reducing Human Bias in Phenotyping
Echoing these points, Chris Reberg-Horton at North Carolina 
State University emphasizes that data preparation remains 
the biggest bottleneck. His team, working with the USDA 
Agricultural Research Service, is completing a large-scale AI 
crop imagery project called the Ag Image Repository (AgIR). 
The dataset includes 1.5 million plant images and trains AI sys­
tems to recognize species and growth stages. The team plans a 
nationwide release this fall.
“Obtaining quality images, processing and annotating them 
is where the bulk of the work occurs,” he says. “When we get a 
new grant or contract, 95% of the effort goes into these steps.”
Esleyther Henriquez Inoa demonstrates field-scale phenotyping 
systems that capture large volumes of plant data, supporting 
AI-driven analysis across breeding trials. 
PHOTO: NC STATE 

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